Abbreviations and acronyms

°C

Degree Celsius

°N

North latitude

°S

South latitude

µm

Micrometre (= 10-6 m)

4-HPPD

4-Hydroxyphenylpyruvate dioxygenase

AFLP

Amplified fragment length polymorphism

ALS

Acetolactate synthase

AMF

Arbuscular mycorrhizal fungi

AOA

Ammonia-oxidising archaea

AOB

Ammonia-oxidising bacteria

AOP

Apomictic Offspring Producer

ApMV

Apple mosaic virus

ATP

Adenosine triphosphate

AUDA-NEPAD

African Union Development Agency – New Partnership for Africa’s Development

AWC

Australian Wildlife Conservancy

BB

Bacterial blight

BC

Backcross

BCE

Before the Common (or current) Era

BCO

Biological control organism

BPH

Brown planthopper (Nilaparvata lugens)

Bt

Bacillus thuringiensis

C.

Carthamus genus

Cas9

CRISPR associated protein 9

CBC

OECD Chemicals and Biotechnology Committee

cm

Centimetre

cM

Centimorgan (or map unit [m.u.], a unit for measuring genetic linkage)

CMS

Cytoplasmic male sterility

CR

Critically endangered species (IUCN Red List category)

CRISPR

Clustered regularly interspaced short palindromic repeats

CW

Chinese wild rice

DNA

Deoxyribonucleic acid

EGMS

Environment-sensitive genic male sterility

EN

Endangered species (IUCN Red List category)

EPP

Effective pollination period

ETI

Effector-triggered immunity

FAO

Food and Agriculture Organization of the United Nations

FAOSTAT

FAO Statistical Databases

g

Gramme

Gb

Gigabases (= 109 base pairs; genome size unit)

GE

Genetically engineered

GMS

Genetic male sterility

GRH

Green rice leafhopper

GRIN

Germplasm Resources Information Network

GRiSP

Global Rice Science Partnership

GSI

Gametophytic self-incompatibility

GTP

Guanosine-5'-triphosphate

GUS

Beta-glucuronidase

h

Hour

ha

Hectare

iGLMap

Integrated Genetic Linkage Map

ILSI-CERAIRGSP

International Life Sciences Institute – Center for Environmental Risk Assessment

International Rice Genome Sequencing Project

IRRI

International Rice Research Institute

IUCN

International Union for Conservation of Nature

kg

Kilogramme

km

Kilometre

L

Honglian (a wild rice CMS type)

LD

Lead rice

LYP9

Liang-You-Pei-Jiu (a hybrid rice strain)

m

Metre

M.

Malus genus

m2

Square metre

MAS

Marker-assisted selection

Mb

Megabases (=106 base pairs; genome size unit)

Mbp

Megabases pair

mg

Milligramme  

MGMS

Marker-linked GMS

mm

Millimetre

MSU

Michigan State University

Mya

Million years ago

NBS-LRR

Nucleotide-Binding Site Leucine-Rich Repeat

NERICA

New Rice for Africa

NMS

Nuclear male sterility

NT

Near threatened species (IUCN Red List category)

O.

Oryza genus

OECD

Organisation for Economic Co-operation and Development

P.

Pyricularia genus

PA64S

Peiai 64S (a photo-thermo-sensitive genic male sterile line)

PAM

Protospacer adjacent motif

PAMPs

Pathogen-associated molecular patterns

PCD

Programmed cell death

PEG

Polyethylene glycol (method)

pg

Picogramme (= 10-12 g)

PGMS

Photoperiod-sensitive genic male sterility

pH

Potential of hydrogen

PPO

Polyphenol oxidase

PPR

Pentatricopeptide repeat

PR

Pathogenesis-related (protein)

PTI

PAMP-triggered immunity

QTL

Quantitative trait locus (plural form: Q. T. Loci)

RAPD

Random amplified polymorphic DNA

RAP-DB

Rice Annotation Project Database

RBSDV

Rice black-streaked dwarf virus

RDV

Rice dwarf virus

RGSV

Rice grassy stunt virus

RNAi

Ribonucleic acid interference

ROS

Reactive oxygen species

RRSV

Rice ragged stunt virus

RSV

Rice stripe virus

RTBV

Rice tungro bacilliform virus

RTSV

Rice tungro spherical virus

SA

Salicylic acid

SBPH

Small brown planthopper (Laodelphax striatellus)

SDN

Site-directed nuclease

SHROB

OECD Series on Harmonisation of Regulatory Oversight in Biotechnology

SNP

Single nucleotide polymorphism

SRAP

Sequence-related amplified polymorphism

SRBSDV

Southern rice black-streaked dwarf virus

S-RNase

Self-incompatibility ribonuclease

SSR

Simple sequence repeat

t

Tonne

TALENs

Transcription activator-like effector nucleases

TGMS

Thermo-sensitive genic male sterility

TILLING

Targeting Induced Local Lesions IN Genomes

TRD

Transmission ratio distortion

UNEP

United Nations Environment Programme

USDA-ARS

United States Department of Agriculture Agricultural Research Service

VU

Vulnerable species (IUCN Red List category)

WA

Wild abortive

WBPH

Whitebacked planthopper (Sogatella furcifera)

WP-HROB

OECD Working Party on the Harmonisation of Regulatory Oversight in Biotechnology

WP-SNFF

OECD Working Party for the Safety of Novel Foods and Feeds

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